Host plant genetic control of associated fungal and insect species in a Populus hybrid cross.
Identifieur interne : 000347 ( Main/Exploration ); précédent : 000346; suivant : 000348Host plant genetic control of associated fungal and insect species in a Populus hybrid cross.
Auteurs : Sandra J. Simon ; Timothy J. Tschaplinski ; Jared M Leboldus ; Ken Keefover-Ring ; Muhammad Azeem ; Jin-Gui Chen ; David Macaya-Sanz ; William L. Macdonald ; Wellington Muchero ; Stephen P. DifazioSource :
- Ecology and evolution [ 2045-7758 ] ; 2020.
Abstract
Plants employ a diverse set of defense mechanisms to mediate interactions with insects and fungi. These relationships can leave lasting impacts on host plant genome structure such as rapid expansion of gene families through tandem duplication. These genomic signatures provide important clues about the complexities of plant/biotic stress interactions and evolution. We used a pseudo-backcross hybrid family to identify quantitative trait loci (QTL) controlling associations between Populus trees and several common Populus diseases and insects. Using whole-genome sequences from each parent, we identified candidate genes that may mediate these interactions. Candidates were partially validated using mass spectrometry to identify corresponding QTL for defensive compounds. We detected significant QTL for two interacting fungal pathogens and three insects. The QTL intervals contained candidate genes potentially involved in physical and chemical mechanisms of host-plant resistance and susceptibility. In particular, we identified adjoining QTLs for a phenolic glycoside and Phyllocolpa sawfly abundance. There was also significant enrichment of recent tandem duplications in the genomic intervals of the native parent, but not the exotic parent. Tandem gene duplication may be an important mechanism for rapid response to biotic stressors, enabling trees with long juvenile periods to reach maturity despite many coevolving biotic stressors.
DOI: 10.1002/ece3.6266
PubMed: 32551087
PubMed Central: PMC7297788
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Host plant genetic control of associated fungal and insect species in a <i>Populus</i> hybrid cross.</title><author><name sortKey="Simon, Sandra J" sort="Simon, Sandra J" uniqKey="Simon S" first="Sandra J" last="Simon">Sandra J. Simon</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Tschaplinski, Timothy J" sort="Tschaplinski, Timothy J" uniqKey="Tschaplinski T" first="Timothy J" last="Tschaplinski">Timothy J. Tschaplinski</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="M Leboldus, Jared" sort="M Leboldus, Jared" uniqKey="M Leboldus J" first="Jared" last="M Leboldus">Jared M Leboldus</name><affiliation><nlm:affiliation>Forest Engineering, Resources & Management Oregon State University Corvallis Oregon.</nlm:affiliation><wicri:noCountry code="subField">Resources & Management Oregon State University Corvallis Oregon</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Botany and Plant Pathology Oregon State University Corvallis Oregon.</nlm:affiliation><wicri:noCountry code="no comma">Botany and Plant Pathology Oregon State University Corvallis Oregon.</wicri:noCountry></affiliation></author><author><name sortKey="Keefover Ring, Ken" sort="Keefover Ring, Ken" uniqKey="Keefover Ring K" first="Ken" last="Keefover-Ring">Ken Keefover-Ring</name><affiliation><nlm:affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Botany University of Wisconsin-Madison Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Geography University of Wisconsin Madison Wisconsin.</wicri:noCountry></affiliation></author><author><name sortKey="Azeem, Muhammad" sort="Azeem, Muhammad" uniqKey="Azeem M" first="Muhammad" last="Azeem">Muhammad Azeem</name><affiliation><nlm:affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Botany University of Wisconsin-Madison Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Geography University of Wisconsin Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Chemistry COMSATS University Islamabad Abbottabad Pakistan.</nlm:affiliation><wicri:noCountry code="no comma">Department of Chemistry COMSATS University Islamabad Abbottabad Pakistan.</wicri:noCountry></affiliation></author><author><name sortKey="Chen, Jin Gui" sort="Chen, Jin Gui" uniqKey="Chen J" first="Jin-Gui" last="Chen">Jin-Gui Chen</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="Macaya Sanz, David" sort="Macaya Sanz, David" uniqKey="Macaya Sanz D" first="David" last="Macaya-Sanz">David Macaya-Sanz</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Macdonald, William L" sort="Macdonald, William L" uniqKey="Macdonald W" first="William L" last="Macdonald">William L. Macdonald</name><affiliation><nlm:affiliation>Division of Plant and Soil Sciences West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Division of Plant and Soil Sciences West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Muchero, Wellington" sort="Muchero, Wellington" uniqKey="Muchero W" first="Wellington" last="Muchero">Wellington Muchero</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="Difazio, Stephen P" sort="Difazio, Stephen P" uniqKey="Difazio S" first="Stephen P" last="Difazio">Stephen P. Difazio</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:32551087</idno><idno type="pmid">32551087</idno><idno type="doi">10.1002/ece3.6266</idno><idno type="pmc">PMC7297788</idno><idno type="wicri:Area/Main/Corpus">000240</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000240</idno><idno type="wicri:Area/Main/Curation">000240</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000240</idno><idno type="wicri:Area/Main/Exploration">000240</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Host plant genetic control of associated fungal and insect species in a <i>Populus</i> hybrid cross.</title><author><name sortKey="Simon, Sandra J" sort="Simon, Sandra J" uniqKey="Simon S" first="Sandra J" last="Simon">Sandra J. Simon</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Tschaplinski, Timothy J" sort="Tschaplinski, Timothy J" uniqKey="Tschaplinski T" first="Timothy J" last="Tschaplinski">Timothy J. Tschaplinski</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="M Leboldus, Jared" sort="M Leboldus, Jared" uniqKey="M Leboldus J" first="Jared" last="M Leboldus">Jared M Leboldus</name><affiliation><nlm:affiliation>Forest Engineering, Resources & Management Oregon State University Corvallis Oregon.</nlm:affiliation><wicri:noCountry code="subField">Resources & Management Oregon State University Corvallis Oregon</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Botany and Plant Pathology Oregon State University Corvallis Oregon.</nlm:affiliation><wicri:noCountry code="no comma">Botany and Plant Pathology Oregon State University Corvallis Oregon.</wicri:noCountry></affiliation></author><author><name sortKey="Keefover Ring, Ken" sort="Keefover Ring, Ken" uniqKey="Keefover Ring K" first="Ken" last="Keefover-Ring">Ken Keefover-Ring</name><affiliation><nlm:affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Botany University of Wisconsin-Madison Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Geography University of Wisconsin Madison Wisconsin.</wicri:noCountry></affiliation></author><author><name sortKey="Azeem, Muhammad" sort="Azeem, Muhammad" uniqKey="Azeem M" first="Muhammad" last="Azeem">Muhammad Azeem</name><affiliation><nlm:affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Botany University of Wisconsin-Madison Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</nlm:affiliation><wicri:noCountry code="no comma">Department of Geography University of Wisconsin Madison Wisconsin.</wicri:noCountry></affiliation><affiliation><nlm:affiliation>Department of Chemistry COMSATS University Islamabad Abbottabad Pakistan.</nlm:affiliation><wicri:noCountry code="no comma">Department of Chemistry COMSATS University Islamabad Abbottabad Pakistan.</wicri:noCountry></affiliation></author><author><name sortKey="Chen, Jin Gui" sort="Chen, Jin Gui" uniqKey="Chen J" first="Jin-Gui" last="Chen">Jin-Gui Chen</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="Macaya Sanz, David" sort="Macaya Sanz, David" uniqKey="Macaya Sanz D" first="David" last="Macaya-Sanz">David Macaya-Sanz</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Macdonald, William L" sort="Macdonald, William L" uniqKey="Macdonald W" first="William L" last="Macdonald">William L. Macdonald</name><affiliation><nlm:affiliation>Division of Plant and Soil Sciences West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Division of Plant and Soil Sciences West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author><author><name sortKey="Muchero, Wellington" sort="Muchero, Wellington" uniqKey="Muchero W" first="Wellington" last="Muchero">Wellington Muchero</name><affiliation><nlm:affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</nlm:affiliation><wicri:noCountry code="no comma">Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</wicri:noCountry></affiliation></author><author><name sortKey="Difazio, Stephen P" sort="Difazio, Stephen P" uniqKey="Difazio S" first="Stephen P" last="Difazio">Stephen P. Difazio</name><affiliation><nlm:affiliation>Department of Biology West Virginia University Morgantown West Virginia.</nlm:affiliation><wicri:noCountry code="no comma">Department of Biology West Virginia University Morgantown West Virginia.</wicri:noCountry></affiliation></author></analytic><series><title level="j">Ecology and evolution</title><idno type="ISSN">2045-7758</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Plants employ a diverse set of defense mechanisms to mediate interactions with insects and fungi. These relationships can leave lasting impacts on host plant genome structure such as rapid expansion of gene families through tandem duplication. These genomic signatures provide important clues about the complexities of plant/biotic stress interactions and evolution. We used a pseudo-backcross hybrid family to identify quantitative trait loci (QTL) controlling associations between <i>Populus</i> trees and several common <i>Populus</i> diseases and insects. Using whole-genome sequences from each parent, we identified candidate genes that may mediate these interactions. Candidates were partially validated using mass spectrometry to identify corresponding QTL for defensive compounds. We detected significant QTL for two interacting fungal pathogens and three insects. The QTL intervals contained candidate genes potentially involved in physical and chemical mechanisms of host-plant resistance and susceptibility. In particular, we identified adjoining QTLs for a phenolic glycoside and <i>Phyllocolpa</i> sawfly abundance. There was also significant enrichment of recent tandem duplications in the genomic intervals of the native parent, but not the exotic parent. Tandem gene duplication may be an important mechanism for rapid response to biotic stressors, enabling trees with long juvenile periods to reach maturity despite many coevolving biotic stressors.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32551087</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2045-7758</ISSN><JournalIssue CitedMedium="Print"><Volume>10</Volume><Issue>11</Issue><PubDate><Year>2020</Year><Month>Jun</Month></PubDate></JournalIssue><Title>Ecology and evolution</Title><ISOAbbreviation>Ecol Evol</ISOAbbreviation></Journal><ArticleTitle>Host plant genetic control of associated fungal and insect species in a <i>Populus</i> hybrid cross.</ArticleTitle><Pagination><MedlinePgn>5119-5134</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1002/ece3.6266</ELocationID><Abstract><AbstractText>Plants employ a diverse set of defense mechanisms to mediate interactions with insects and fungi. These relationships can leave lasting impacts on host plant genome structure such as rapid expansion of gene families through tandem duplication. These genomic signatures provide important clues about the complexities of plant/biotic stress interactions and evolution. We used a pseudo-backcross hybrid family to identify quantitative trait loci (QTL) controlling associations between <i>Populus</i> trees and several common <i>Populus</i> diseases and insects. Using whole-genome sequences from each parent, we identified candidate genes that may mediate these interactions. Candidates were partially validated using mass spectrometry to identify corresponding QTL for defensive compounds. We detected significant QTL for two interacting fungal pathogens and three insects. The QTL intervals contained candidate genes potentially involved in physical and chemical mechanisms of host-plant resistance and susceptibility. In particular, we identified adjoining QTLs for a phenolic glycoside and <i>Phyllocolpa</i> sawfly abundance. There was also significant enrichment of recent tandem duplications in the genomic intervals of the native parent, but not the exotic parent. Tandem gene duplication may be an important mechanism for rapid response to biotic stressors, enabling trees with long juvenile periods to reach maturity despite many coevolving biotic stressors.</AbstractText><CopyrightInformation>© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Simon</LastName><ForeName>Sandra J</ForeName><Initials>SJ</Initials><AffiliationInfo><Affiliation>Department of Biology West Virginia University Morgantown West Virginia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tschaplinski</LastName><ForeName>Timothy J</ForeName><Initials>TJ</Initials><AffiliationInfo><Affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>M LeBoldus</LastName><ForeName>Jared</ForeName><Initials>J</Initials><Identifier Source="ORCID">https://orcid.org/0000-0003-3303-4269</Identifier><AffiliationInfo><Affiliation>Forest Engineering, Resources & Management Oregon State University Corvallis Oregon.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Botany and Plant Pathology Oregon State University Corvallis Oregon.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Keefover-Ring</LastName><ForeName>Ken</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Azeem</LastName><ForeName>Muhammad</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Botany University of Wisconsin-Madison Madison Wisconsin.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Geography University of Wisconsin Madison Wisconsin.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Chemistry COMSATS University Islamabad Abbottabad Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Jin-Gui</ForeName><Initials>JG</Initials><AffiliationInfo><Affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Macaya-Sanz</LastName><ForeName>David</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Department of Biology West Virginia University Morgantown West Virginia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>MacDonald</LastName><ForeName>William L</ForeName><Initials>WL</Initials><AffiliationInfo><Affiliation>Division of Plant and Soil Sciences West Virginia University Morgantown West Virginia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Muchero</LastName><ForeName>Wellington</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Biosciences Division and Center for Bioenergy Innovation Oak Ridge National Laboratory Oak Ridge Tennessee.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>DiFazio</LastName><ForeName>Stephen P</ForeName><Initials>SP</Initials><Identifier Source="ORCID">https://orcid.org/0000-0003-4077-1590</Identifier><AffiliationInfo><Affiliation>Department of Biology West Virginia University Morgantown West Virginia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>04</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Ecol Evol</MedlineTA><NlmUniqueID>101566408</NlmUniqueID><ISSNLinking>2045-7758</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Populus</Keyword><Keyword MajorTopicYN="N">community genetics</Keyword><Keyword MajorTopicYN="N">comparative genomics</Keyword><Keyword MajorTopicYN="N">plant–biotic interactions</Keyword><Keyword MajorTopicYN="N">tandem duplication</Keyword></KeywordList><CoiStatement>None declared.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>01</Month><Day>30</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2020</Year><Month>03</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>03</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>6</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>6</Month><Day>20</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>6</Month><Day>20</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32551087</ArticleId><ArticleId IdType="doi">10.1002/ece3.6266</ArticleId><ArticleId IdType="pii">ECE36266</ArticleId><ArticleId IdType="pmc">PMC7297788</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Trends Genet. 2004 Mar;20(3):116-22</Citation><ArticleIdList><ArticleId IdType="pubmed">15049302</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2005 May;138(1):153-60</Citation><ArticleIdList><ArticleId IdType="pubmed">15821148</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2012 Apr;40(7):e49</Citation><ArticleIdList><ArticleId IdType="pubmed">22217600</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2006 Apr;15(5):1275-97</Citation><ArticleIdList><ArticleId IdType="pubmed">16626454</ArticleId></ArticleIdList></Reference><Reference><Citation>Evolution. 2000 Apr;54(2):526-33</Citation><ArticleIdList><ArticleId IdType="pubmed">10937229</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Phytopathol. 2001;39:285-312</Citation><ArticleIdList><ArticleId IdType="pubmed">11701867</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2001 Nov;91(11):1081-4</Citation><ArticleIdList><ArticleId IdType="pubmed">18943444</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Entomol. 2004;49:175-92</Citation><ArticleIdList><ArticleId IdType="pubmed">14651461</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2006 Feb 24;124(4):803-14</Citation><ArticleIdList><ArticleId IdType="pubmed">16497589</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2009 Aug 15;25(16):2078-9</Citation><ArticleIdList><ArticleId IdType="pubmed">19505943</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2015 Apr 24;10(4):e0124669</Citation><ArticleIdList><ArticleId IdType="pubmed">25909656</ArticleId></ArticleIdList></Reference><Reference><Citation>Ann Bot. 2002 Dec;90(6):681-9</Citation><ArticleIdList><ArticleId IdType="pubmed">12451023</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2006;170(4):657-75</Citation><ArticleIdList><ArticleId IdType="pubmed">16684230</ArticleId></ArticleIdList></Reference><Reference><Citation>Oecologia. 1991 Sep;88(1):15-21</Citation><ArticleIdList><ArticleId IdType="pubmed">28312726</ArticleId></ArticleIdList></Reference><Reference><Citation>Am Nat. 2006 Jul;168(1):121-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16874619</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2003 May 1;19(7):889-90</Citation><ArticleIdList><ArticleId IdType="pubmed">12724300</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2017 Oct 25;8:1806</Citation><ArticleIdList><ArticleId IdType="pubmed">29118773</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2001 Oct;91(10):981-5</Citation><ArticleIdList><ArticleId IdType="pubmed">18944125</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2012 Nov;196(3):713-25</Citation><ArticleIdList><ArticleId IdType="pubmed">22861491</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Genet. 2006 Jul;7(7):510-23</Citation><ArticleIdList><ArticleId IdType="pubmed">16778835</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11573-11578</Citation><ArticleIdList><ArticleId IdType="pubmed">30337484</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2014 Jul 29;9(7):e103477</Citation><ArticleIdList><ArticleId IdType="pubmed">25072596</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Plant Biol. 2003;54:23-61</Citation><ArticleIdList><ArticleId IdType="pubmed">14502984</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS J. 2011 Jan;278(2):195-205</Citation><ArticleIdList><ArticleId IdType="pubmed">21156024</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2002 Oct;12(10):1611-8</Citation><ArticleIdList><ArticleId IdType="pubmed">12368254</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2011 Jun;23(6):2247-62</Citation><ArticleIdList><ArticleId IdType="pubmed">21642549</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytochemistry. 2011 Sep;72(13):1497-509</Citation><ArticleIdList><ArticleId IdType="pubmed">21376356</ArticleId></ArticleIdList></Reference><Reference><Citation>Theor Appl Genet. 2004 Aug;109(3):451-63</Citation><ArticleIdList><ArticleId IdType="pubmed">15168022</ArticleId></ArticleIdList></Reference><Reference><Citation>J Chem Ecol. 2004 Dec;30(12):2419-38</Citation><ArticleIdList><ArticleId IdType="pubmed">15724964</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2001 Jun;46(3):347-59</Citation><ArticleIdList><ArticleId IdType="pubmed">11488481</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2008;59(9):2347-60</Citation><ArticleIdList><ArticleId IdType="pubmed">18544608</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta Med. 1989 Aug;55(4):333-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17262434</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2008 Mar;146(3):888-903</Citation><ArticleIdList><ArticleId IdType="pubmed">18024557</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2011 Nov 1;27(21):2987-93</Citation><ArticleIdList><ArticleId IdType="pubmed">21903627</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2005 Jul;17(7):2009-19</Citation><ArticleIdList><ArticleId IdType="pubmed">15937228</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2014 Jul;203(2):535-53</Citation><ArticleIdList><ArticleId IdType="pubmed">24750093</ArticleId></ArticleIdList></Reference><Reference><Citation>J Insect Physiol. 2016 Jan;84:103-113</Citation><ArticleIdList><ArticleId IdType="pubmed">26620152</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Plant Sci. 2016 May 31;7:742</Citation><ArticleIdList><ArticleId IdType="pubmed">27303429</ArticleId></ArticleIdList></Reference><Reference><Citation>Stud Mycol. 2013 Jun 30;75(1):213-305</Citation><ArticleIdList><ArticleId IdType="pubmed">24014901</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2011 Aug 1;27(15):2156-8</Citation><ArticleIdList><ArticleId IdType="pubmed">21653522</ArticleId></ArticleIdList></Reference><Reference><Citation>EMBO J. 1994 Jul 1;13(13):2976-84</Citation><ArticleIdList><ArticleId IdType="pubmed">8039494</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2009 Dec;184(4):865-84</Citation><ArticleIdList><ArticleId IdType="pubmed">19780988</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol Biochem. 2010 Apr;48(4):279-87</Citation><ArticleIdList><ArticleId IdType="pubmed">20199866</ArticleId></ArticleIdList></Reference><Reference><Citation>Oecologia. 2009 Jan;158(4):651-62</Citation><ArticleIdList><ArticleId IdType="pubmed">18949489</ArticleId></ArticleIdList></Reference><Reference><Citation>Ecol Evol. 2015 Jul;5(14):2839-50</Citation><ArticleIdList><ArticleId IdType="pubmed">26306170</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 2011 Jan;1814(1):36-45</Citation><ArticleIdList><ArticleId IdType="pubmed">20883828</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Dis. 2000 Feb;84(2):203</Citation><ArticleIdList><ArticleId IdType="pubmed">30841334</ArticleId></ArticleIdList></Reference><Reference><Citation>Ann Bot. 2019 Oct 29;124(4):617-626</Citation><ArticleIdList><ArticleId IdType="pubmed">30689716</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2014 Dec;23(23):5888-903</Citation><ArticleIdList><ArticleId IdType="pubmed">25243489</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86</Citation><ArticleIdList><ArticleId IdType="pubmed">22110026</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2019 Mar 20;9(1):4946</Citation><ArticleIdList><ArticleId IdType="pubmed">30894616</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2001 Jun 22;292(5525):2281-5</Citation><ArticleIdList><ArticleId IdType="pubmed">11423651</ArticleId></ArticleIdList></Reference><Reference><Citation>J Chem Ecol. 1994 Sep;20(9):2455-66</Citation><ArticleIdList><ArticleId IdType="pubmed">24242817</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2001 Jun 14;411(6839):843-7</Citation><ArticleIdList><ArticleId IdType="pubmed">11459067</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2006 Jul;224(2):288-99</Citation><ArticleIdList><ArticleId IdType="pubmed">16404575</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1981 Oct;99(2):357-64</Citation><ArticleIdList><ArticleId IdType="pubmed">17249122</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2015 Jan 23;16:24</Citation><ArticleIdList><ArticleId IdType="pubmed">25613058</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant J. 2007 Aug;51(4):681-92</Citation><ArticleIdList><ArticleId IdType="pubmed">17573802</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2016 Sep 01;17:699</Citation><ArticleIdList><ArticleId IdType="pubmed">27580945</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Entomol. 2003;48:549-77</Citation><ArticleIdList><ArticleId IdType="pubmed">12460937</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list></list><tree><noCountry><name sortKey="Azeem, Muhammad" sort="Azeem, Muhammad" uniqKey="Azeem M" first="Muhammad" last="Azeem">Muhammad Azeem</name><name sortKey="Chen, Jin Gui" sort="Chen, Jin Gui" uniqKey="Chen J" first="Jin-Gui" last="Chen">Jin-Gui Chen</name><name sortKey="Difazio, Stephen P" sort="Difazio, Stephen P" uniqKey="Difazio S" first="Stephen P" last="Difazio">Stephen P. Difazio</name><name sortKey="Keefover Ring, Ken" sort="Keefover Ring, Ken" uniqKey="Keefover Ring K" first="Ken" last="Keefover-Ring">Ken Keefover-Ring</name><name sortKey="M Leboldus, Jared" sort="M Leboldus, Jared" uniqKey="M Leboldus J" first="Jared" last="M Leboldus">Jared M Leboldus</name><name sortKey="Macaya Sanz, David" sort="Macaya Sanz, David" uniqKey="Macaya Sanz D" first="David" last="Macaya-Sanz">David Macaya-Sanz</name><name sortKey="Macdonald, William L" sort="Macdonald, William L" uniqKey="Macdonald W" first="William L" last="Macdonald">William L. Macdonald</name><name sortKey="Muchero, Wellington" sort="Muchero, Wellington" uniqKey="Muchero W" first="Wellington" last="Muchero">Wellington Muchero</name><name sortKey="Simon, Sandra J" sort="Simon, Sandra J" uniqKey="Simon S" first="Sandra J" last="Simon">Sandra J. Simon</name><name sortKey="Tschaplinski, Timothy J" sort="Tschaplinski, Timothy J" uniqKey="Tschaplinski T" first="Timothy J" last="Tschaplinski">Timothy J. Tschaplinski</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000347 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000347 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:32551087
|texte= Host plant genetic control of associated fungal and insect species in a Populus hybrid cross.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:32551087" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
| This area was generated with Dilib version V0.6.37. |  |